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On this page you can browse through all packages in the Fink package database, optionally and at your direction narrowed down by various search parameters, set below.

This database includes information about all packages found in the respective latest stable and unstable trees. Furthermore, all packages from the most recent binary distributions are covered.


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Matched 696 packages (Section = 'sci')

NameLatest VersionDescription
4ti21.3.2-2Software for algebra, geometry, combinatorics
4ti2-dev1.3.2-2Software for algebra, geometry, combinatorics
abs0.908-13Opensource spreadsheet
alidot2.05-1Detecting Conserved RNA Structures
amigos0.3-1Outputs tables of torsion angles from PDB files
apbs1.1.0-7Adaptive Poisson-Boltzmann Solver
apbs-dev1.1.0-7apbs headers, static libraries and libtool files
apbs-mpi-lammpi1.1.0-7Adaptive Poisson-Boltzmann Solver
apbs-mpi-lammpi-dev1.1.0-7apbs headers, static libraries and libtool files
apbs-mpi-openmpi1.1.0-7Adaptive Poisson-Boltzmann Solver
apbs-mpi-openmpi-dev1.1.0-7apbs headers, static libraries and libtool files
arb20071207-1007Phylogeny and sequence data management
arpack96patched-1Solve large scale eigenvalue problems
ast5.2.0-3Library for handling world coordinate systems
ast-shlibs5.2.0-3Library for handling world coordinate systems
atlas3.9.11-1Portably optimal linear algebra software
atlas-doc3.9.11-1Portably optimal linear algebra software
atlas-shlibs3.9.11-1Portably optimal linear algebra software
avl3.27-1Aerodynamic analysis
babel1.6-5Molecular modelling file converter
biggles-py241.6.5-1002Python module for 2D scientific plotting
biggles-py251.6.5-1002Python module for 2D scientific plotting
biggles-py261.6.5-1002Python module for 2D scientific plotting
bkchem0.13.0-32D molecular drawing program
blitz0.9-1C++ class library for scientific computing
bodr8-3Blue Obelisk Data Repository
boxshade3.3.1-2Pretty-prints multiple sequence alignments
cadabra1.16-3Computer algebra system for field theory
calc2.11.5.8-1016C-style arbitrary precision calculator
calcoo1.3.18-9Gtk+ based scientific calculator
ccp46.1.2-4Macromolecular crystallography package
ccp4-dev6.1.2-4CCP4 static libraries and libtool files
ccp4-shlibs6.1.2-4CCP4 dynamic libraries
ccpnmr-py252.0.7.1-1NMR Software Suite (using OpenGL)
ccpnmr-py262.0.7.1-1NMR Software Suite (using OpenGL)
cdat4.0-1014Climate Data Analysis Tools
cdo1.3.1-2Climate Data Operators
cernlib2005-g772005-2014Paw and other basic executables
cernlib2005-g77-dev2005-2014Basic libraries and include files
cernlib2005-g77-geant3212005-2014GEANT 3.2.1
cernlib2005-g77-mclibs2005-2014Monte-carlo libraries and files
cernlib2005-g77-paw++2005-2014Paw++: Motif enhanced paw
cernlib2005-gfortran2005-3012Paw and other basic executables
cernlib2005-gfortran-dev2005-3012Basic libraries and include files
cernlib2005-gfortran-geant3212005-3012GEANT 3.2.1
cernlib2005-gfortran-mclibs2005-3012Monte-carlo libraries and files
cernlib2005-gfortran-paw++2005-3012Paw++: Motif enhanced paw
cgraph2.04-3Postscript plotting library in C
chemical-mime-data0.1.94-1006Chemical MIME and file type support for desktops
chemtool1.6.12-3Draws 2-D pictures of organic molecules
chooch5.0.2-5Anomalous f' and f" from Xray flourescence
classicladder0.8.2-2Free ladder logic simulator in C
clhep1.9.2.3-51Class library for high energy physics
clhep-data1.9.2.3-51PDG information
clhep-shlibs1.9.2.3-51Shared library for CLHEP
clhep22.0.4.3-51Class library for high energy physics
clhep2-shlibs2.0.4.3-51Shared library for CLHEP
clipper2.1-13Object-oriented crystallographic libraries
clipper-dev2.1-13Object-oriented crystallographic libraries
clipper-shlibs2.1-13Object-oriented crystallographic libraries
cln1.1.13-2C++ Class Library for Numbers
cln-shlibs1.1.13-2C++ Class Library for Numbers
clnum-py241.4-2High precision floating point Python library
clnum-py251.4-2High precision floating point Python library
clustalw1.83-3Multiple Sequence Alignment Program
clustalx2.0.12-1002GUI for clustalw
clustalx-mac2.0.12-1003GUI for clustalw
coot0.6-pre-1-revision-2450-1Crystallographic molecular graphics
coot-dev0.6-pre-1-revision-2450-1Crystallographic molecular graphics
coot-shlibs0.6-pre-1-revision-2450-1Crystallographic molecular graphics
coq8.0pl3-1The Coq interactive proof assistant
coqide8.0pl3-3Interactive development environment for Coq
cwp-su38-1Seismic Unix - Seismic data processing tools
dap-py242.2.6.6-1Python Data Access Protocol (dap)
dap-py252.2.6.6-1Python Data Access Protocol (dap)
dap-py262.2.6.6-1Python Data Access Protocol (dap)
dcmtk3.5.4-1002Collection of DICOM libs and applications
dcmtk-ssl3.5.4-1002Placeholder package to update to unified dcmtk. (OBSOLETE)
decoders4.1.4-4Packages to decode GRIB and text into netCDF
dicelab0.6-2Evaluates the statistical distribution of dice rolls
dome4.80-1002Calculates and draws geodesic domes
drawtiming0.7-1Program to generate circuit timing diagrams
dx4.4.4-1004Open Visualization Data Explorer
dx-hdf50.4.5-1000Modules for importing hdf5 files into opendx
dx-samples4.4.0-1000Sample data and tutorials for use with dx
dynagraph1.3f-10023D plotting utility for X
easychem0.6-3Program designed to draw chemical molecules
eden5.3-7Electron density holographic refinement
eigen22.0.6-1C++ template library for linear algebra
ellipt2d-py241.8-2General purpose, finite-element tool
ellipt2d-py251.8-2General purpose, finite-element tool
emboss6.1.0-3Molecular Biology Open Software Suite
emboss-ajax6-dev6.1.0-3Molecular Biology Open Software Suite
emboss-ajax6-shlibs6.1.0-3Molecular Biology Open Software Suite
emboss-kaptain0.98-1Kaptain grammars for EMBOSS
emboss-nucleus6-dev6.1.0-3Molecular Biology Open Software Suite
emboss-nucleus6-shlibs6.1.0-3Molecular Biology Open Software Suite
emboss-plplot6-dev6.1.0-3Molecular Biology Open Software Suite
emboss-plplot6-shlibs6.1.0-3Molecular Biology Open Software Suite
embossdb-rebase509-1Restriction Enzyme Database for EMBOSS
engauge-digitizer4.1-1003Extracts numbers from bitmap graphs or maps
eprover0.999-004-1Powerful equational logic theorem prover
eukleides1.0.3-1001Euclidean geometry drawing language
euler1.61.0-5Numerical laboratory with a programming language
fastlink4.1p-3Genetic linkage anaylysis programs
fasttree2.0.1-2Fast inference of phylogenetic trees
fauhdlc20090512-1VHDL compiler and interpreter
fftw2.1.5-1015Discrete Fourier Transform Library
fftw-absoft2.1.3-2Library for computing the Discrete Fourier Transform
fftw-absoft-shlibs2.1.3-2Library for computing the Discrete Fourier Transform
fftw-mpi2.1.5-1015Discrete Fourier Transform Library
fftw-mpi-shlibs2.1.5-1015Discrete Fourier Transform Library
fftw-shlibs2.1.5-1015Discrete Fourier Transform Library
fftw33.2.2-1Discrete Fourier Transform Lib (Ver 3)
fftw3-shlibs3.2.2-1Discrete Fourier Transform Lib (Ver 3)
fityk-cli0.3.2-1004Curve fitting and data analysis software
freefem++2.20-4Finite element program
freehelix98-12Nucleic acid helix analysis program
freesolid2.1.1-1001Library for 3D collidion detection
freesolid-shlibs2.1.1-1001Library for 3D collidion detection
gaiw0.2.0pre1-1013ASCII data import front-end for Grace
garlic1.6-2Visualization program for biomolecules
gdis0.89-2Molecular and lattice graphics system
gdl0.9pre6-1001GNU Data Language
geant4.84.8.3-64Simulation of particle-matter interaction
geant4.8-cernlib-g774.8.3-64Simulation of particle-matter interaction
geant4.8-cernlib-g77-shlibs4.8.3-64Shared libraries for GEANT4 8.3
geant4.8-cernlib-gfortran4.8.3-64Simulation of particle-matter interaction
geant4.8-cernlib-gfortran-shlibs4.8.3-64Shared libraries for GEANT4 8.3
geant4.8-data4.8.3-11Optional datafiles for GEANT4 8
geant4.8-shlibs4.8.3-64Shared libraries for GEANT4 8.3
geant4.94.9.2-22Simulation of particle-matter interaction
geant4.9-cernlib-g774.9.2-22Simulation of particle-matter interaction
geant4.9-cernlib-g77-shlibs4.9.2-22Shared libraries for GEANT4 9.2
geant4.9-cernlib-gfortran4.9.2-22Simulation of particle-matter interaction
geant4.9-cernlib-gfortran-shlibs4.9.2-22Shared libraries for GEANT4 9.2
geant4.9-data4.9.2-11Optional datafiles for GEANT4 9
geant4.9-shlibs4.9.2-22Shared libraries for GEANT4 9.2
geda-bundle1.6.0-1Bundle of electronic design automation tools
geda-doc1.6.0-3Placeholder to update geda-doc to geda-gaf (OBSOLETE)
geda-examples1.6.0-3Placeholder to update geda-examples to geda-gaf (OBSOLETE)
geda-gaf1.6.0-3GNU EDA -- Electronics design -- base
geda-gattrib1.6.0-3Placeholder to update geda-gattrib to geda-gaf (OBSOLETE)
geda-gnetlist1.6.0-3Placeholder to update geda-gnetlist to geda-gaf (OBSOLETE)
geda-gschem1.6.0-3Placeholder to update geda-gschem to geda-gaf (OBSOLETE)
geda-gsymcheck1.6.0-3Placeholder to update geda-gsymcheck to geda-gaf (OBSOLETE)
geda-symbols1.6.0-3Placeholder to update geda-symbols to geda-gaf (OBSOLETE)
geda-utils1.6.0-3Placeholder to update geda-utils to geda-gaf (OBSOLETE)
geg1.0.2-2Simple GTK+ Equation Grapher
genehunter2.1.r5-1Multipoint linkage analysis
genius1.0.7-1Math calculator and graphing package
geojson-py261.0.1-1Encoder/decoder for simple GIS features
geomview1.9.4-1001Interactive 3D viewing program
geomview191-dev1.9.1-1001Interactive 3D viewing program
geomview191-shlibs1.9.1-1001Interactive 3D viewing program
geomview194-dev1.9.4-1001Interactive 3D viewing program
geomview194-shlibs1.9.4-1001Interactive 3D viewing program
geotypes-py250.7.0-1OpenGIS/PostGIS/postgres geometry types
gibbs9.95-2Gibbs sampling algorithm for protein sequences
gildas200911-2Radioastronomy data analysis software
glpk4.26-1GNU Linear Programming Kit
glpk-dev4.26-1GNU Linear Programming Kit
glpk-java4.19-1Java bindings for GLPK
glpk-shlibs4.26-1GNU Linear Programming Kit
gmsh2.2.5-1002Three-dimensional finite element mesh generator
gmt4.5.1-1Generic Mapping Tools
gmt-dev4.5.1-1Generic Mapping Tools
gmt-doc4.5.1-1Generic Mapping Tools
gmt-shlibs4.5.1-1Generic Mapping Tools
gnucap0.35-1003GNU Circuit Analysis Package
gnuplot4.2.5-2Command-driven interactive plotting program
gnuplot-nogtk4.2.5-2Command-driven interactive plotting program
gnuplot-nox4.2.5-2Command-driven interactive plotting program
gnuplot-pdfdocs4.2.4-2PDF documents for gnuplot
gnuplot-py241.8-1001Python interface to gnuplot
gnuplot-py251.8-1001Python interface to gnuplot
gnuplot-py261.8-1001Python interface to gnuplot
gopenmol3.00-1006Molecular visualization and analysis program
gperiodic2.0.10-2Displays a periodic table of the elements
gpiv0.6.1-1Particle image velocimetry (GUI)
gpivtools0.6.0-2Particle image velocimetry (CLI tools)
gpp41.2.0-1Library providing CCP4 functionality
gpp4-dev1.2.0-1Library providing CCP4 functionality
gpp4-shlibs1.2.0-1Library providing CCP4 functionality
grace5.1.22-3Data processing and 2-D visualization tool
grass626.2.3-1Powerful GIS software
grass62-dev6.2.3-1GRASS Development Headers
grass62-shlibs6.2.3-1GRASS Shared Libraries
grass646.4.0-2Powerful GIS software
grass64-dev6.4.0-2GRASS Development Headers
grass64-pgsql6.4.0-2Powerful GIS software
grass64-pgsql-dev6.4.0-2GRASS Development Headers
grass64-pgsql-shlibs6.4.0-2GRASS Shared Libraries
grass64-shlibs6.4.0-2GRASS Shared Libraries
gretl1.7.6-2GNU Econometrics package
gretl-dev1.7.6-2GNU Econometrics package
gretl-shlibs1.7.6-2GNU Econometrics package
gri2.12.8-1003Scientific graphics language
gromacs4.0.5-1004Molecular dynamics package
gromacs-bin4.0.5-1004Molecular dynamics package
gromacs-dev4.0.5-1004Molecular dynamics package
gromacs-mpi-lammpi4.0.5-1004Molecular dynamics package (Parallel version)
gromacs-mpi-lammpi-bin4.0.5-1004Molecular dynamics package (Parallel version)
gromacs-mpi-lammpi-dev4.0.5-1004Molecular dynamics package (Parallel version)
gromacs-mpi-lammpi-shlibs4.0.5-1004Molecular dynamics package (Parallel version)
gromacs-mpi-openmpi4.0.5-1004Molecular dynamics package (Parallel version)
gromacs-mpi-openmpi-bin4.0.5-1004Molecular dynamics package (Parallel version)
gromacs-mpi-openmpi-dev4.0.5-1004Molecular dynamics package (Parallel version)
gromacs-mpi-openmpi-shlibs4.0.5-1004Molecular dynamics package (Parallel version)
gromacs-shlibs4.0.5-1004Molecular dynamics package
gshhs-hires2.0.1-1GSHHS shorelines, rivers, borders (high res)
gshhs-lores2.0.1-1GSHHS shorelines, rivers, borders (low res)
gsl1.12-1GNU Scientific Library
gsl-shlibs1.12-1GNU Scientific Library
gtkgraph0.6.2-4Graphing calculator using Gtk+
h5py-py261.2.0-1HDF5 data interface
h5utils1.11.1-1Convert HDF5 datasets into various formats
harminv1.3.1-4Harmonic Inversion of Time Signals
hdf4.2r1-1012Scientific data format
hdf51.6.8-4Library and file format for scientific data
hdf5-181.8.2-3Library and file format for scientific data (v1.8 API)--headers
hdf5-18-bin1.8.2-3Library and file format for scientific data (v1.8 API)--executables
hdf5-18-gfortran1.8.2-2Library and file format for scientific data--fortran bindings
hdf5-18-shlibs1.8.2-3Library and file format for scientific data (v1.8 API)--shared libraries
hdf5-bin1.6.8-4Library and file format for scientific data
hdf5-shlibs1.6.8-4Library and file format for scientific data
hmmer2.2g-3Profile HMMs for biological sequence analysis
imosflm1.0.3-2Installs mosflm GUI for use with X11 TclTk
imosflm-aqua1.0.3-1Installs mosflm GUI for use with aqua TclTk
inchi-dev2.0.2-1003Pick up where Babel left off
infernal1.0-1RNA secondary structure alignments
ioapi3.0-1I/O API library for environmental modeling
iolib1.12.1-1Library of reading and writing chromatograms
iolib-dev1.12.1-1Library of reading and writing chromatograms
iolib-shlibs1.12.1-1Library of reading and writing chromatograms
k3dsurf0.6.2-1002Surface renderer, can export 3D models
kalign1.04-2Multiple sequence alignment
kemboss-qt4-mac0.10-1Emboss GUI
kemboss-qt4-x110.10-1Emboss GUI
kseg0.403-1021Program for exploring Euclidean geometry
labplot1.6.0.rel2-2Data analysis and visualisation
labplot-shlibs1.6.0.rel2-2Data analysis and visualisation
libarprec2.2.2-1002C++/Fortran-90 arbitrary precision package
libdap33.5.2-1006DAP 2.0 C++ SDK
libdap3-shlibs3.5.2-1006DAP 2.0 C++ SDK
libdap63.7.8-14DAP 2.0 C++ SDK
libdap6-shlibs3.7.8-14DAP 2.0 C++ SDK
libdap83.7.10-6DAP 2.0 C++ SDK
libdap8-shlibs3.7.10-6DAP 2.0 C++ SDK
libdap93.8.2-2DAP 2.0 C++ SDK
libdap9-shlibs3.8.2-2DAP 2.0 C++ SDK
libecat1.5-4Library for handling CTI data files, headers
libecat-bin1.5-4Library for handling CTI data files, executables
libecat-shlibs1.5-4Library for handling CTI data files, shared libraries
libgeda1.6.0-3Placeholder to update libgeda to geda-gaf (OBSOLETE)
libgeda33-data1.6.0-3Placeholder to update libgeda to geda-gaf (OBSOLETE)
libgeda33-shlibs1.6.0-3Placeholder to update libgeda33-shlibs to geda-gaf (OBSOLETE)
libghemical2.98-1008Computational chemistry lib for ghemical
libghemical-shlibs2.98-1008Computational chemistry lib for ghemical
libgpiv30.6.1-3Particle image velocimetry
libgpiv3-shlibs0.6.1-3Particle image velocimetry (shared libs)
libinchi0-shlibs2.0.2-1003Pick up where Babel left off
libmatheval1.1.6-1Symbolic-expression evaluation
libmatheval-shlibs1.1.6-1Symbolic-expression evaluation
libmatio1.3.3-4MAT File I/O Library
libmatio-shlibs1.3.3-4MAT File I/O Library
libnc-dap33.7.3-2OPeNDAP netCDF Client Library
libnc-dap3-shlibs3.7.3-2OPeNDAP netCDF Client Library
libopenbabel1-shlibs2.0.2-1003Pick up where Babel left off
liborigin20070115-2Library for reading OPJ files
liborigin-bin20070115-2Library for reading OPJ files
liborigin-shlibs20070115-2Library for reading OPJ files
libpolyxmass100.9.0-3Utility library for polyxmass suite
libpolyxmass10-shlibs0.9.0-3Utility library for polyxmass suite
libqd2.3.7-1004C++/Fortran-90 double-double and quad-double package
libqfits06.2.0-4Library offering easy access to FITS files
libqfits0-shlibs6.2.0-4Library offering easy access to FITS files, shared libraries
libsvm2numpy-py25r300-1Pythonic interface for libsvm
libsvm2numpy-py26r300-1Pythonic interface for libsvm
lie2.2.2-1Specialized computer algebra package
lpsolve5.5.0.13-1Mixed Integer Linear Programming (ILP) solver
lpsolve-extra5.5.0.13-1External Language Interfaces for lpsolve
lpsolve-java5.5.0.11-1Java bindings for lpsolve
lpsolve-octave5.5.0.13-5Octave interface to the mixed LP pkg lpsolve
lpsolve-python5.5.0.13-1Python interface to the mixed LP pkg lpsolve
lpsolve-scilab5.5.0.12-1Scilab interface to the mixed LP pkg lpsolve
lpsolve5.5-dev5.5.0.13-1Mixed Integer Linear Programming (ILP) solver
lpsolve5.5-shlibs5.5.0.13-1Mixed Integer Linear Programming (ILP) solver
macaulay21.2-1001Computer algebra systm for algebraic geometry
macaulay2-64bit1.2-1001Computer algebra systm for algebraic geometry
magic717.1-20070406-2Very capable VLSI layout CAD tool
magic747.4.59-1Very capable VLSI layout CAD tool
mapmaker3.0-1016Interactive genetic linkage mapping package
massxpert1.6.7-1004Mass spectrometric package, uses Qt4
mathomatic14.5.3-1Symbolic algebra program
matplotlib-basemap-data-py240.9.5-2High resolution data files for basemap matplotlib toolkit
matplotlib-basemap-data-py250.9.5-2High resolution data files for basemap matplotlib toolkit
matplotlib-basemap-py240.99.4-1Plot data on map projections with matplotlib
matplotlib-basemap-py250.99.4-1Plot data on map projections with matplotlib
matplotlib-basemap-py260.99.4-1Plot data on map projections with matplotlib
matplotlib-py240.99.0-1Pure python 2D plotting with a Matlab syntax
matplotlib-py250.99.0-1Pure python 2D plotting with a Matlab syntax
matplotlib-py260.99.0-1Pure python 2D plotting with a Matlab syntax
mayavi-py251.5-3Free, easy to use scientific data visualizer
mayavi2-py253.2.0-1Mayavi scientific data 3D visualizer
mbsystem5.1.2-1Processing and Displaying Swath Sonar Data
mbsystem-dev5.1.2-1Processing and Displaying Swath Sonar Data
meep1.0.1-1FDTD simulation
meep-mpi1.0.1-1FDTD simulation
melina2.3-1Finite Element Research Code
meschach1.2b-1Calculations on matrices and vectors
meschach-shlibs1.2b-1Calculations on matrices and vectors
minfx-py241.0.2-1The minfx optimisation library
minfx-py251.0.2-1The minfx optimisation library
minfx-py261.0.2-1The minfx optimisation library
mizar7.11.03-4.128.1063-1Build and check first-order formal proofs
mizar-bin7.11.03-4.128.1063-1Build and check first-order formal proofs
mizar-doc7.11.03-4.128.1063-1Build and check first-order formal proofs
mizar-gab4.100.1011-1Generated ABstracts for articles in the MML
mizar-gab-html4.99.1005-1HTML presentation of Generated ABstracts
mizar-mml7.11.03-4.128.1063-1Build and check first-order formal proofs
mizar-mode2007.01-5Work with Mizar files in Emacs
mizar-semantic-mml4.117.1046-1Semantic HTML presentation of the MML
mmdb1.21-13Macromolecular coordinate library
mmdb-dev1.21-13Macromolecular coordinate library
mmdb-shlibs1.21-13Macromolecular coordinate library
mmtk2.4.4-1001Molecular Modelling Toolkit
modulef99-7Classic Finite Element Package
modulefdoc99-1Documentation for Modulef
molden4.7-4Visualization program of molecular and electronic structure
molmol2k.2.0-1044Molecular graphics display program
mopac71.14-4Powerful, fast semi-empirical package
mopac7-dev1.14-4Powerful, fast semi-empirical package
mopac7-shlibs1.14-4Powerful, fast semi-empirical package
mosflm7.0.5-2X-ray data processing, large display
mpb1.4.2-1025Compute band structures of photonic crystals
mtz2hkl0.3-1Convert mtz to shelx data format
mumsa1.0-2A program to assess the quality of multiple sequence alignments
muparser1.28-3Fast math parser library
muparser-shlibs1.28-3Fast math parser shared library
muscle3.7-1003Protein multiple sequence alignment software
namot2.2.0-pre4-1013Nucleic Acid MOdelling Tool
ncarg4.4.1-6Package for scientific visualization
ncbitools2.2.6-1003NCBI software development toolkit
ncl4.2.0.a032-2NCAR command language
nco3.9.5-4The netCDF Operators
nco-dap3.9.8-2The netCDF Operators (DAP-enabled version)
ncview1.93g-1001Graphical display of NetCDF files
netcdf3.6.3-2Interface & lib for array-based data access
netcdf-absoft3.5.1-1014Lib for array-oriented data & interface to Absoft Fortran
netcdf-absoft-bin3.5.1-1014Lib for array-oriented data & interface to Absoft Fortran
netcdf-absoft-shlibs3.5.1-1014Lib for array-oriented data & interface to Absoft Fortran
netcdf-bin3.6.3-2Interface & lib for array-based data access
netcdf-g953.6.3-5Interface & lib for array-based data access
netcdf-g95-shlibs3.6.3-5Interface & lib for array-based data access
netcdf-gfortran3.6.3-5Interface & lib for array-based data access
netcdf-gfortran-shlibs3.6.3-5Interface & lib for array-based data access
netcdf-perl-pm5861.2.3-7Perl extension for netCDF datasets access
netcdf-perl-pm5881.2.3-7Perl extension for netCDF datasets access
netcdf-shlibs3.6.3-2Interface & lib for array-based data access
netgen4.4-123D mesh generator and Finite Element solver
netgen-doc4.4-12Documented source code for NETGEN/NGSolve
ngspicerework-19-1Mixed-level/mixed-signal circuit simulator
nickle2.46-1003Desk Calculator scripting language
nifticlib1.0.0-1I/O routines to read/write nifti-1 datasets
nightfall1.62-3Astronomy app for fun, education, and science
nodelib1.30.1-1Neural Optimization Development Engine library
ntl5.4.2-1001Library for doing number theory
ntl-64bit5.4.2-1001Library for doing number theory
numarray-py241.5.2-2N-dimensional array package for Python
numarray-py251.5.2-2N-dimensional array package for Python
numarray-py261.5.2-2N-dimensional array package for Python
numeric-py2424.2-3N-dimensional array package for Python
numeric-py2524.2-3N-dimensional array package for Python
numeric-py2624.2-3N-dimensional array package for Python
octave3.0.5-2Matlab-like language for computations
octave-atlas3.0.5-2Matlab-like language for computations
octave-docs3.0.5-1Documentation for octave, various formats
octave-forge-data-smoothing1.1.1-2Data smoothing package for octave
octave-forge-general1.0.7-3General tools for Octave
octave-forge-graceplot1.0.6-6Graceplot bindings for octave
octave-forge-gsl1.0.7-3GSL bindings for octave
octave-forge-image1.0.7-4Image tools for octave
octave-forge-io1.0.7-6I/O package for octave
octave-forge-miscellaneous1.0.7-4Mixcellaneous package for octave
octave-forge-nan1.0.7-3Missing value statistical toolbox for octave
octave-forge-octcdf1.0.12-1Netcdf package for octave
octave-forge-optim1.0.4-4Optimization package for octave
octave-forge-outliers0.13.9-1Outlier detection routines for octave
octave-forge-physicalconstants0.1.6-4Physical constants for octave
octave-forge-plot1.0.6-2Additional plotting tools for Octave
octave-forge-signal1.0.8-4Signal processing toolkit for octave
octave-forge-specfun1.0.7-5Special functions for Octave
octave-forge-tsa4.0.0-2Time series analysis package for octave
octave-forge-zenity0.5.6-2Zenity interface for octave
octave3.0.23.0.2-5Package to transition back to 'octave'
octave3.0.2-atlas3.0.2-5Package to transition back to 'octave-atlas'
octplot-aqua0.4.0-11Handle graphics package for Octave
octplot-x110.4.0-11Handle graphics package for Octave
oleo1.99.16-1021The GNU spreadsheet
openbabel2.0.2-1003Pick up where Babel left off
openbabel-common2.0.2-1003Pick up where Babel left off
openbabel-dev2.0.2-1003Pick up where Babel left off
oregano0.60.0-1Electrical schematic capture and simulation
orrery0.9.5-1001Digital model of the solar system, a geomview module
ortep31.0.3-4Thermal ellipsoid plot program for crystal structure illustrations
otter3.3f-1Tools for first-order models and theorems
owslib-py250.3.1-1OGC Web Service utility library in Python
owslib-py260.3.1-1OGC Web Service utility library in Python
pari-gp2.3.4-1003Computer-aided number theory (calculator and C-library)
pari-gp-64bit2.3.4-1003Computer-aided number theory (calculator and C-library)
pari-gp-nox2.3.4-1003Computer-aided number theory (calculator and C-library)
pari-gp-nox-64bit2.3.4-1003Computer-aided number theory (calculator and C-library)
pari-gp-xemacs2.3.4-1003Computer-aided number theory (calculator and C-library)
pari-gp-xemacs-64bit2.3.4-1003Computer-aided number theory (calculator and C-library)
patchy4-gfortran4.15-4CERNLIB patchy utilities
patchy5-g772005-2014CERNLIB patchy utilities
patchy5-gfortran2005-3012CERNLIB patchy utilities
pcl-core-py250.11.0-1Python Cartographic Library
pcl-core-py260.11.0-1Python Cartographic Library
pdb2pqr1.4.0-4Converts pdb files to pqr
pfamserver7.6-3WWW Pfam server
pgplot5.2-1032Fortran- or C-callable scientific graphics package
phylip3.65-2Package of programs for inferring phylogenies
ploticus22.20-14Creates graphical data displays
ploticus2-dev2.20-14Ploticus C API
ploticus2-nox2.20-24Creates graphical data displays (no X11)
ploticus2-nox-dev2.20-24Ploticus C API (no X11)
ploticus2-nox-shlibs2.20-24Ploticus C API (no X11)
ploticus2-shlibs2.20-14Ploticus C API
plotmtv1.4.4t-2Plotting program for visualization of scientific data
plotutils2.4.1-1010Functions for exporting 2-D vector graphics
plotutils-dev2.4.1-1010Functions for exporting 2-D vector graphics
plotutils-shlibs2.4.1-1010Functions for exporting 2-D vector graphics
plplot5.8.0-1015Scientific plotting package
plplot-dev5.8.0-1015Scientific plotting package
plplot-nognome5.8.0-1015Scientific plotting package
plplot-nognome-dev5.8.0-1015Scientific plotting package
plplot-nognome-shlibs5.8.0-1015Scientific plotting package
plplot-shlibs5.8.0-1015Scientific plotting package
pmag1.8.3-1Paleomagnetic analysis tools
polymake2.3-1Framework for experimental discrete geometry
polymake-pm51002.3-1Polymake components requiring a special perl version
polymake-pm5882.3-1Polymake components requiring a special perl version
polyxmass0.9.2-4Utility for mass-spectrometry of polymers
polyxmass-common0.8.7-2Required data files for polyxmass
polyxmass-doc0.8.8-3Documentation for polyxmass
polyxmass-examples0.8.6-2Additional definition files for polyxmass
porta1.4.0-2Routines for analyzing polyhedra
primegen0.97-2Prime number generator
proj4.7.0-1Cartographic projections library
proj-shlibs4.7.0-1Cartographic projections library
prover92008-11a-1Prove theorems and build models
pspp0.4.0-1002Statistical analysis program
pstplus1.4.1-1002LaTeX/PStricks helper for mathematical documents
pyfits-py241.3-1Python interface to FITS formatted files
pyfits-py251.3-1Python interface to FITS formatted files
pyfits-py261.3-1Python interface to FITS formatted files
pygist-py241.5.23-2Python interface for Gist
pygist-py251.5.23-2Python interface for Gist
pygist-py261.5.23-2Python interface for Gist
pygsl-py240.9.0-1Python interface for the GSL
pygsl-py250.9.0-1Python interface for the GSL
pygsl-py260.9.0-1Python interface for the GSL
pymol-py251.2r0-1002Molecular graphics system
pymol-py261.2r0-1002Molecular graphics system
pynifti-py240.20080710.1-1SWIG wrappers for the NIfTI library
pynifti-py250.20080710.1-1SWIG wrappers for the NIfTI library
pynifti-py260.20080710.1-1SWIG wrappers for the NIfTI library
pyproj-py241.8.6-1Projection conversions in python
pyproj-py251.8.6-1Projection conversions in python
pyproj-py261.8.6-1Projection conversions in python
pytables-py242.1.1-1Hierarchical datasets in Python
pytables-py252.1.1-1Hierarchical datasets in Python
pytables-py262.1.1-1Hierarchical datasets in Python
pythia88.108-11Generator of high-energy physics events
pythia8-shlibs8.108-11Generator of high-energy physics events
pyvtk-py240.4.70-1Tools for manipulating VTK files in Python
pyvtk-py250.4.70-1Tools for manipulating VTK files in Python
pywavelets-py240.1.6-2Python module for wavelet transforms
pywavelets-py250.1.6-2Python module for wavelet transforms
pywavelets-py260.1.6-2Python module for wavelet transforms
qepcad1.53-2Tarski's Quantifier Elimination
qepcad-gcc441.53-2Tarski's Quantifier Elimination
qfits6.2.0-4FITS manipulation tools
qgfe1.0-1002Graphical frontend for gnuplot, uses Qt3
qgis-mac1.0.2-12User friendly Open Source GIS
qgis-mac-dev1.0.2-12QGIS Header Libraries
qgis-mac-grass1.0.2-12User friendly Open Source GIS
qgis-mac-grass-dev1.0.2-12QGIS Header Libraries
qgis-mac-grass-shlibs1.0.2-12QGIS Shared Libraries
qgis-mac-pgsql1.0.2-12User friendly Open Source GIS
qgis-mac-pgsql-dev1.0.2-12QGIS Header Libraries
qgis-mac-pgsql-grass1.0.2-12User friendly Open Source GIS
qgis-mac-pgsql-grass-dev1.0.2-12QGIS Header Libraries
qgis-mac-pgsql-grass-shlibs1.0.2-12QGIS Shared Libraries
qgis-mac-pgsql-shlibs1.0.2-12QGIS Shared Libraries
qgis-mac-shlibs1.0.2-12QGIS Shared Libraries
qhull2002.1-10Calculate convex hulls and related structures
qprop1.21-1002Propeller + motor performance analysis
qtiplot0.8.9-rc2-2Data analysis and scientific plotting
qtiplot-qt4-mac0.9.7.6-3Data analysis and scientific plotting
qtiplot-qt4-x110.9.7.6-3Data analysis and scientific plotting
qtoctave0.7.4-1006transition package to varianted qtoctave
qtoctave-mac0.8.2-1002Graphical frontend for octave, uses Qt4
qtoctave-x110.8.2-1002Graphical frontend for octave, uses Qt4
quadtree-py250.1.2-1Python quad tree data structure
quadtree-py260.1.2-1Python quad tree data structure
qucs0.0.13-1001Qt based integrated circuit simulator
r-base2.7.0-1Environment for statistical computing
rasmol2.7.5-2Molecular graphics visualisation tool
rasmol-8bit2.7.5-2Molecular graphics visualisation tool
regina-normal4.6-1Computational 3-manifold topology software
regina-normal-dev4.4-3Development files for 3-manifold topology software
regina-normal4.3.1-shlibs4.3.1-2Shared libraries for 3-manifold topology software
regina-normal4.4-shlibs4.4-3Shared libraries for 3-manifold topology software
regina-normal4.5-dev4.5-3Development files for 3-manifold topology software
regina-normal4.5-shlibs4.5-3Shared libraries for 3-manifold topology software
regina-normal4.5.1-dev4.5.1-2Development files for 3-manifold topology software
regina-normal4.5.1-shlibs4.5.1-2Shared libraries for 3-manifold topology software
regina-normal4.6-dev4.6-1Development files for 3-manifold topology software
regina-normal4.6-shlibs4.6-1Shared libraries for 3-manifold topology software
relax-py241.3.4-2Protein dynamics by NMR relax. data analysis
relax-py251.3.4-2Protein dynamics by NMR relax. data analysis
relax-py261.3.4-2Protein dynamics by NMR relax. data analysis
ribbons3.32-4Molecular graphics creation program
rnabob2.1-3Fast RNA motif/pattern searcher
rnamotif3.0.4-2RNA search for secondary structure motifs
rnaview1.0-3RNA tertiary structure plots
roofitcore-root41.09.02-53Toolkit for modeling physics event distributions
roofitcore-root4-shlibs1.09.02-53Shared libs of RooFitCore built against root4
roofitmodels-root41.09.02-52Models of physics event distributions
roofitmodels-root4-shlibs1.09.02-52Shared libs of RooFitModels built against root4
root-pythia6.5-11Interface libraries Pythia - ROOT
root-pythia-shlibs6.5-11Interface libraries Pythia - ROOT
root44.04.02g-1051Object-oriented data analysis framework
root4-cernlib4.04.02g-1051Object-oriented data analysis framework
root4-cernlib-shlibs4.04.02g-1051Shared libraries for root4-cernlib
root4-shlibs4.04.02g-1051Shared libraries for root4
root55.22.00b-11Object-oriented data analysis framework
root5-cernlib5.22.00b-11Object-oriented data analysis framework
root5-cernlib-geant45.22.00b-11Object-oriented data analysis framework
root5-cernlib-geant4-qt5.22.00b-11Object-oriented data analysis framework
root5-cernlib-geant4-qt-shlibs5.22.00b-11Shared libraries for root5-cernlib-geant4-qt
root5-cernlib-geant4-shlibs5.22.00b-11Shared libraries for root5-cernlib-geant4
root5-cernlib-qt5.22.00b-11Object-oriented data analysis framework
root5-cernlib-qt-shlibs5.22.00b-11Shared libraries for root5-cernlib-qt
root5-cernlib-shlibs5.22.00b-11Shared libraries for root5-cernlib
root5-devel5.23.02-12Development version of ROOT
root5-devel-cernlib5.23.02-12Development version of ROOT
root5-devel-cernlib-geant45.23.02-12Development version of ROOT
root5-devel-cernlib-geant4-qt5.23.02-12Development version of ROOT
root5-devel-cernlib-geant4-qt-shlibs5.23.02-12Shared libraries for root5-devel-cernlib-geant4-qt
root5-devel-cernlib-geant4-shlibs5.23.02-12Shared libraries for root5-devel-cernlib-geant4
root5-devel-cernlib-qt5.23.02-12Development version of ROOT
root5-devel-cernlib-qt-shlibs5.23.02-12Shared libraries for root5-devel-cernlib-qt
root5-devel-cernlib-shlibs5.23.02-12Shared libraries for root5-devel-cernlib
root5-devel-geant45.23.02-12Development version of ROOT
root5-devel-geant4-qt5.23.02-12Development version of ROOT
root5-devel-geant4-qt-shlibs5.23.02-12Shared libraries for root5-devel-geant4-qt
root5-devel-geant4-shlibs5.23.02-12Shared libraries for root5-devel-geant4
root5-devel-qt5.23.02-12Development version of ROOT
root5-devel-qt-shlibs5.23.02-12Shared libraries for root5-devel-qt
root5-devel-shlibs5.23.02-12Shared libraries for root5-devel
root5-geant45.22.00b-11Object-oriented data analysis framework
root5-geant4-qt5.22.00b-11Object-oriented data analysis framework
root5-geant4-qt-shlibs5.22.00b-11Shared libraries for root5-geant4-qt
root5-geant4-shlibs5.22.00b-11Shared libraries for root5-geant4
root5-qt5.22.00b-11Object-oriented data analysis framework
root5-qt-shlibs5.22.00b-11Shared libraries for root5-qt
root5-shlibs5.22.00b-11Shared libraries for root5
rpy-py241.0.3-1Python module to access R functions
rpy-py251.0.3-1Python module to access R functions
rpy-py261.0.3-1Python module to access R functions
rpy2-py252.0.8-1Python module to access R functions
rpy2-py262.0.8-1Python module to access R functions
rsearch1.1-10RNA database search with structure queries
saclib2.2.1-1Computer algebra, specially on ordered fields
saclib-gcc442.2.1-1Computer algebra, specially on ordered fields
scientificpython-py242.8-1Python modules for scientific computing
scientificpython-py24-bin2.8-1Python modules for scientific computing
scientificpython-py252.8-1Python modules for scientific computing
scientificpython-py25-bin2.8-1Python modules for scientific computing
scientificpython-py262.8-1Python modules for scientific computing
scientificpython-py26-bin2.8-1Python modules for scientific computing
scilab4.1.2-1006Software package for numerical computations
scilab-atlas4.1.2-1006Software package for numerical computations
scipy-core-py241.3.0-3N-dimensional array package for Python
scipy-core-py251.3.0-3N-dimensional array package for Python
scipy-core-py261.3.0-3N-dimensional array package for Python
scipy-py240.7.0-3Scientific tools for Python
scipy-py250.7.0-3Scientific tools for Python
scipy-py260.7.0-3Scientific tools for Python
setiathome3.03-1Distributed SETI data-analysis client
sextractor2.8.6-2Catalogue of objects from astronomical images
shapely-py251.0.14-1Geospatial geometries, predicates, operations
shapely-py261.0.14-1Geospatial geometries, predicates, operations
sigma1.1.1-2Simple greedy multiple alignment of non-coding DNA sequences
simplesegy-py260.7-1Segy seismic data reader
singular3.1.0-0Computer Algebra system
singular-doc3.1.0-1Singular documentation
skycal5-1Astronomer's almanac tools
slatec4.1-2Common Mathematical Library
snns4.2-12Software Simulator for Neural Networks
snpfile2.0.1-1002A library and API for manipulating large SNP datasets
snpfile-bin2.0.1-1002A library and API for manipulating large SNP datasets
socnetv0.70-1002Social Networks Visualizer, uses Qt4
socnetv-mac0.70-1002Social Networks Visualizer, uses Qt4-Mac
sparky-py243.115-1002NMR Assignment and Integration Software
sparky-py253.115-1002NMR Assignment and Integration Software
sparky-py263.115-1002NMR Assignment and Integration Software
spice3f5sfix-14SPICE - circuit simulation
ssm0.1-13Macromolecular coordinate library
ssm-dev0.1-13Macromolecular coordinate library
ssm-shlibs0.1-13Macromolecular coordinate library
stellarium0.10.2-3Obsolete upgrade package, do not use
stellarium-mac0.10.2-3Real time 3D sky renderer
stellarium-x110.10.2-3Real time 3D sky renderer
stride1.0-2Knowledge-based protein secondary structure assignment from atomic coord...
suitesparse3.1.0-1Suite of Sparse matrix packages
sunwait20041208-2Calculates sunrise, sunset, and twilights
surf1.0.5-1Tool to visualize real algebraic geometry
surfer0.0.120-2Visualization of algebraic surfaces
sympy-py240.6.4-1Python library for symbolic mathematics
sympy-py250.6.4-1Python library for symbolic mathematics
sympy-py260.6.4-1Python library for symbolic mathematics
tcoffee8.13-101T-Coffee Multiple Sequence Alignment Program
tempo1.2.3-1002EDF file visualizer
tetgen1.4.2-1002A Quality Tetrahedral Mesh Generator
tinker5.0-1Molecular modeling software package
tinysvm0.09-1002Support Vector Machines
tinysvm-dev0.09-1002Support Vector Machines
tinysvm-shlibs0.09-1002Support Vector Machines
tkgate1.8.6-11Digital circuit simulator
tksu0.1.32-2TclTk GUI for CWP-SU (Seismic Unix)
triangle1.6-2Tiny but powerful 2D mesh generator
udunits1.12.9-2Manipulation units of physical quantities
udunits-dev1.12.9-2Manipulation units of physical quantities
udunits22.1.7-4Manipulation units of physical quantities
udunits2-dev2.1.7-4Manipulation units of physical quantities (headers)
udunits2-shlibs2.1.7-4Manipulation units of physical quantities (shared libs)
viennarna1.8.1-2RNA structural prediction
viennarna-dev1.8.1-2RNA structural prediction
visual-py243.2.9-1004VPython - 3D Programming for Ordinary Mortals
visual-py253.2.9-1004VPython - 3D Programming for Ordinary Mortals
visual-py265.12-2VPython - 3D Programming for Ordinary Mortals
vtk-py255.0.4-3The Visualization ToolKit
vtk525.2.1-2The Visualization ToolKit, X11 version
vtk52-carbon5.2.1-2The Visualization ToolKit, carbon version
vtk52-carbon-dev5.2.1-2VTK headers and compile-time libraries
vtk52-carbon-shlibs5.2.1-2VTK shared libraries, carbon version
vtk52-cocoa5.2.1-2The Visualization ToolKit, cocoa version
vtk52-cocoa-dev5.2.1-2VTK headers and compile-time libraries
vtk52-cocoa-shlibs5.2.1-2VTK shared libraries, cocoa version
vtk52-dev5.2.1-2VTK headers and compile-time libraries
vtk52-shlibs5.2.1-2VTK shared libraries, X11 version
vtk545.4.0-1The Visualization ToolKit, X11 version
vtk54-carbon5.4.0-1The Visualization ToolKit, Carbon version
vtk54-carbon-dev5.4.0-1VTK headers and compile-time libraries
vtk54-carbon-shlibs5.4.0-1VTK shared libraries, Carbon version
vtk54-cocoa5.4.0-2The Visualization ToolKit, Cocoa version
vtk54-cocoa-dev5.4.0-2VTK headers and compile-time libraries
vtk54-cocoa-shlibs5.4.0-2VTK shared libraries, Carbon version
vtk54-dev5.4.0-1VTK headers and compile-time libraries
vtk54-shlibs5.4.0-1VTK shared libraries, X11 version
vtkdata5.2.0-1Data for VTK
wcstools3.7.6-1World coordinate system tools for astronomy
weka3.4.4-1Machine learning/pattern recognition in java
weka-doc3.4.4-1Docs on machine learning and pattern recognition
whatcheck8.0-1001Protein verification tools from WhatIf
wip2p3-1010Interactive graphics software package
wise22.2.0-3Intelligent algorithms for DNA searches
wise2-dev2.2.0-3Intelligent algorithms for DNA searches
wwwblast2.2.9-2WWW BLAST
xcircuit3.4.30-1Circuit drawing app with schematic capture
xcircuit-testing3.6.145-1Circuit drawing app with schematic capture
xdrawchem1.9.9-11Chemical drawing program
xephem3.7.3-1Astronomical Software Ephemeris
xeukleides1.0.1-1Euclidean geometry drawing language (X11)
xfoil696-1002Design and analyze subsonic isolated airfoils
xgraph12.1-1Program to graphically display numerical data
xlispstat3-52-20-2Lisp-based environment for statistics
xmakemol5.16-1View atomic and molecular systems
xmedcon0.10.5-2Open source toolkit for medical image conversion
xmedcon-dev0.10.5-2Open source toolkit for medical image conversion
xmedcon-shlibs0.10.5-2Open source toolkit for medical image conversion
xmgr4.1.2-12D plotting tool (ancestor to grace)
xmolwt0.7-17Molecular weight calculator
xyscan3.2.1-1002Extracts data points (numbers) from plots
yacas1.0.61-2Yet Another Computer Algebra System
yacas-shlibs1.0.61-2Yet Another Computer Algebra System
yorick2.1.05-1Interpreted language and scientific graphics
yorick-z1.2-2Add-on for the Yorick interpreted language
zhu3d4.2.2-1002Functions viewer/animator, uses Qt4 and OpenGL
zhu3d-aqua4.2.0-1002Functions viewer/animator, uses Qt4 and OpenGL
zimpl2.09-2Modeling language for optimization problems

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